Package: chms 7.1.9000

Joel Barnes

chms: Accelerometer Processing Methods for Cycle 7 of the CHMS

'ActiGraph wGT3X-BT' accelerometer processing methods using the standardized workflow developed by Statistics Canada for cycle 7 of the Canadian Health Measures Survey (CHMS). The package promotes transparent and reproducible data processing while supporting the harmonization of analytical approaches among researchers wishing to align with Statistics Canada's methods. For general details about the processing methods, please consult Clarke J, Gribbon A, St-Laurent M, Ferrao T, Barnes J, Kuzik N, Colley R (2026) <doi:10.25318/82-003-x202600200001-eng>.

Authors:Joel Barnes [aut, cre], Janine Clarke [ctb], Rachel Colley [ctb], His Majesty the King in Right of Canada, as represented by Statistics Canada [cph]

chms_7.1.9000.tar.gz
chms_7.1.9000.zip(r-4.7-any)chms_7.1.9000.zip(r-4.6-any)chms_7.1.9000.zip(r-4.5-any)
chms_7.1.9000.tgz(r-4.6-any)chms_7.1.9000.tgz(r-4.5-any)
chms_7.1.9000.tar.gz(r-4.7-any)chms_7.1.9000.tar.gz(r-4.6-any)
chms_7.1.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
chms/json (API)

# Install 'chms' in R:

install.packages('chms', repos = c('https://statcan.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/statcan/chms/issues

On CRAN:

4.24 score 7 stars 481 downloads 14 exports 52 dependencies

Last updated from:2e3790c083. Checks:7 NOTE, 2 OK. Indexed: yes.

Target	Result	Time
linux-devel	NOTE	130
source / vignettes	OK	184
linux-release	NOTE	164
macos-release	NOTE	228
macos-oldrel	NOTE	237
windows-devel	NOTE	144
windows-release	NOTE	120
windows-oldrel	NOTE	128
wasm-release	OK	120

Exports:agd agd_worker apply_barreira_algo apply_general_bout_algo apply_non_wear_algo apply_sadeh_algo apply_tudor_locke_algo classify_agd_data clean_agd_data get_chms_meta load_agd_data load_agd_settings run_agd_job summarize_agd_data

Dependencies:bit bit64 blob cachem cli clipr cpp11 crayon DBI dbplyr dplyr evaluate fastmap forcats generics glue haven highr hms jsonlite knitr lattice lifecycle lubridate magrittr memoise mirai nanonext parallelly pillar pkgconfig prettyunits progress purrr R6 readr rlang RSQLite stringi stringr tibble tidyr tidyselect timechange tzdb utf8 vctrs vroom withr xfun yaml zoo

Help page	Topics
R6 class: 'agd'	agd
R6 class: 'agd_worker'	agd_worker
Classify an accelerometer axis vector of 60-second epochs as sleep time or awake time.	apply_barreira_algo
Classify an accelerometer axis vector of epochs based on a set of bout rules.	apply_general_bout_algo
Classify an accelerometer axis vector of epochs as wear time or non-wear time based on a set of bout rules.	apply_non_wear_algo
Classify an accelerometer axis vector of 60-second epochs as sleep time or awake time.	apply_sadeh_algo
Classify an accelerometer axis vector of 60-second epochs as sleep time or awake time.	apply_tudor_locke_algo
Classify epochs in an ActiGraph '.agd' file.	classify_agd_data
Prepare an ActiGraph '.agd' file for downstream classification.	clean_agd_data
Gets CHMS participant metadata.	get_chms_meta
Load the 'data' table from an ActiGraph '.agd' file.	load_agd_data
Load the 'settings' table from an ActiGraph '.agd' file.	load_agd_settings
Plot method for the agd R6 class.	plot.agd
Plot method for the agd_worker R6 class.	plot.agd_worker
Run a job that initiates an ActiGraph data processing pipeline for a single participant.	run_agd_job
Summarizes an ActiGraph '.agd' file.	summarize_agd_data
Summary method for the agd R6 class.	summary.agd
Summary method for the agd_worker R6 class.	summary.agd_worker

Package: chms 7.1.9000

chms: Accelerometer Processing Methods for Cycle 7 of the CHMS

Citation

Development and contributors

Readme and manuals

Help Manual

Usage by other packages (reverse dependencies)